Difference between revisions of "Informatics"

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'''Informatics''' is the management of information.
'''Informatics''' is the management of information. [[Pathologist]]s, unfortunately, mostly have poor tools for this job.   
 
Pathologists, unfortunately, mostly have poor tools for this job.   
 
The two main pathology information systems (''[[Softpath]]'' and ''[[CoPath]]'') look like software from the 1990s.


==Software in use at pathology departments==
==Software in use at pathology departments==
===Information systems===
===Information systems===
*[[Softpath]].  
*[[Softpath]].  
*[[CoPath]] - considered state-of-the-art... good only by comparison.
*[[CoPath]].
*[[MEDITECH]].
*[[MEDITECH]].


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==Open source==
==Open source==
Open source in pathology appears to be some way off.  One paper,<ref name=pmid15563662>{{cite journal |author=Rubin A |title=An open pathology computer system |journal=J. Clin. Pathol. |volume=57 |issue=12 |pages=1252–3 |year=2004 |month=December |pmid=15563662 |pmc=1770514 |doi=10.1136/jcp.2004.020826 |url=}}</ref> gives me a bit of hope -- though I think this is a voice in the wilderness.   
Open source in pathology appears to be some way off.  One opinion paper<ref name=pmid15563662>{{cite journal |author=Rubin A |title=An open pathology computer system |journal=J. Clin. Pathol. |volume=57 |issue=12 |pages=1252–3 |year=2004 |month=December |pmid=15563662 |pmc=1770514 |doi=10.1136/jcp.2004.020826 |url=}}</ref> addresses this issue. 
 
The radiologists are more on the ball here, e.g. [http://www.mii.ucla.edu/opensourcepacs-download-2/ UCLA's OpenSourcePACS].<ref name=pmid17249408>{{Cite journal  | last1 = Bui | first1 = AA. | last2 = Morioka | first2 = C. | last3 = Dionisio | first3 = JD. | last4 = Johnson | first4 = DB. | last5 = Sinha | first5 = U. | last6 = Ardekani | first6 = S. | last7 = Taira | first7 = RK. | last8 = Aberle | first8 = DR. | last9 = El-Saden | first9 = S. | title = OpenSourcePACS: an extensible infrastructure for medical image management. | journal = IEEE Trans Inf Technol Biomed | volume = 11 | issue = 1 | pages = 94-109 | month = Jan | year = 2007 | doi =  | PMID = 17249408 }}</ref>  


The radiologists are more on the ball here, e.g. [http://www.mii.ucla.edu/opensourcepacs-download-2/ UCLA's OpenSourcePACS].<ref name=pmid17249408>{{Cite journal  | last1 = Bui | first1 = AA. | last2 = Morioka | first2 = C. | last3 = Dionisio | first3 = JD. | last4 = Johnson | first4 = DB. | last5 = Sinha | first5 = U. | last6 = Ardekani | first6 = S. | last7 = Taira | first7 = RK. | last8 = Aberle | first8 = DR. | last9 = El-Saden | first9 = S. | title = OpenSourcePACS: an extensible infrastructure for medical image management. | journal = IEEE Trans Inf Technol Biomed | volume = 11 | issue = 1 | pages = 94-109 | month = Jan | year = 2007 | doi =  | PMID = 17249408 }}</ref>  A few institutions (mostly American) are coming to understand this and have formed the [http://www.opendp.org/ Open Digital Pathology Consortium].
A few institutions (mostly American) are coming to understand this and have formed the [http://www.opendp.org/ Open Digital Pathology Consortium].


==Virtual slides==
==Virtual slides==
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==References==
==References==
{{reflist|1}}
{{reflist|2}}


[[Category:Informatics]]
[[Category:Informatics]]

Revision as of 12:01, 2 May 2014

Informatics is the management of information. Pathologists, unfortunately, mostly have poor tools for this job.

Software in use at pathology departments

Information systems

Dictation

Content management

Pathology wikis

  • Wiki use for the dissemination of pathology knowledge is increasing.
  • In the general sphere, Wikipedia is dominating and will probably continue to do so.[1]

Open source

Open source in pathology appears to be some way off. One opinion paper[2] addresses this issue.

The radiologists are more on the ball here, e.g. UCLA's OpenSourcePACS.[3]

A few institutions (mostly American) are coming to understand this and have formed the Open Digital Pathology Consortium.

Virtual slides

  • There is a push for an open virtual slide format.
  • A free C library exists to read whole-slide images.[4]

See also

References

  1. Heilman, JM.; Kemmann, E.; Bonert, M.; Chatterjee, A.; Ragar, B.; Beards, GM.; Iberri, DJ.; Harvey, M. et al. (2011). "Wikipedia: a key tool for global public health promotion.". J Med Internet Res 13 (1): e14. doi:10.2196/jmir.1589. PMID 21282098.
  2. Rubin A (December 2004). "An open pathology computer system". J. Clin. Pathol. 57 (12): 1252–3. doi:10.1136/jcp.2004.020826. PMC 1770514. PMID 15563662. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1770514/.
  3. Bui, AA.; Morioka, C.; Dionisio, JD.; Johnson, DB.; Sinha, U.; Ardekani, S.; Taira, RK.; Aberle, DR. et al. (Jan 2007). "OpenSourcePACS: an extensible infrastructure for medical image management.". IEEE Trans Inf Technol Biomed 11 (1): 94-109. PMID 17249408.
  4. URL: http://openslide.org/. Accessed on: 3 May 2013.